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CA certificates can be made accessible to all users connecting from the same computer. This is possible by manually copying the desired CA certificate files (with the .crt file name extension) from the user account Application Data\SSH\CACertificates directory into the into the %ALLUSERSPROFILE%\Application Data\SSH\CACertificates directory (for example C:\Documents and Settings\All Users\Application Data\SSH\CACertificates on an English-language Windows NT platform).
The globally accessible CA certificates can be seen on the Certificates page of the Settings dialog.